Cortext platform
At Cortext, our goal is to empower researchers in the social sciences and humanities by promoting advanced qualitative-quantitative mixed methods. Our primary focus is on studies about the dynamics of science, technology and innovation, and about the roles of knowledge and expertise in societies.
We understand the move towards digital humanities and computational methods not as addressing a technological gap for the social sciences, but rather as entailing entirely new assemblages between its disciplines and those of modern statistics and computer sciences. We work to tackle ever more complex research problems and deal with the profusion of new and diverse sources of information without losing sight of the situatedness and reflexivity required of studies of human societies.
Cortext is hosted by the LISIS research unit at Gustave Eiffel University, and was launched by French institutes IFRIS and INRAE, receiving their continued support.
Cortext Manager
Cortext Manager is our current main attraction, a publicly available web service providing data analysis methods curated and developed by our team of researchers and engineers.
You upload a textual corpus in order to analyse its discourse, names, categories, citations, places, dates etc, with methods for science/controversy/issue mapping, distant reading, document clustering, geo-spatial and network visualizations, and more.
You can jump straight to Cortext Manager and create an account, but we strongly suggest taking a look at the Documentation and Tutorials as you start your journey.
Latest journal articles employing our instruments
Journal Articles
2020
Gauld, Christophe; Franchi, Jean-Arthur M.
Analyse en réseau par fouille de données textuelles systématique du concept de psychiatrie personnalisée et de précision Journal Article
In: L'Encéphale, 2020, ISSN: 0013-7006.
@article{Gaulda2020,
title = {Analyse en réseau par fouille de données textuelles systématique du concept de psychiatrie personnalisée et de précision},
author = {Christophe Gauld and Jean-Arthur M. Franchi},
url = {http://www.sciencedirect.com/science/article/pii/S0013700620302360},
doi = { https://doi.org/10.1016/j.encep.2020.08.008},
issn = {0013-7006},
year = {2020},
date = {2020-11-12},
urldate = {2020-11-12},
journal = {L'Encéphale},
abstract = {Objectifs. – La médecine personnalisée et de précision nécessite une clarification des concepts qui y sont rattachés. À notre connaissance, il n’existe pas d’exploration systématique de la littérature portant sur les dimensions et les concepts de la psychiatrie personnalisée et de précision et sur leurs usages dans les domaines neuroscientifiques et génétiques. Cet article propose donc d’explorer les dimensions et les concepts de la psychiatrie personnalisée et de précision.
Méthodes. – Une analyse en réseau par fouille de données textuelles systématique issue d’une revue exhaustive de la littérature internationale autour des termes de “precision psychiatry” et de “personalized psychiatry” a été réalisée. Cette fouille de données textuelles a été représentée sous forme d’un réseau permettant d’analyser les dimensions et les concepts de la psychiatrie personnalisée et de précision. Résultats. – La psychiatrie personnalisée et de précision renvoie à six dimensions retrouvées au sein de l’analyse du réseau textuel. Ces six dimensions correspondent aux domaines scientifiques qui étu- dient la psychiatrie personnalisée et de précision, à savoir : la génétique, la pharmacogénétique, les approches computationnelles, le raffinement des essais thérapeutiques, les biomarqueurs et la stadifica- tion. L’analyse des termes renvoie à un ensemble de concepts hétérogènes.
Conclusions. – L’hétérogénéité retrouvée dans la littérature sur la psychiatrie personnalisée et de précision peut témoigner d’un manque d’un cadre théorique pluraliste et intégratif. Ce cadre de travail pourrait être basé sur un formalisme naturalisant mais non réducteur, conscient des enjeux sociétaux des sciences et de leur implémentation dans les dispositifs de recherche et cliniques de la psychiatrie.
Objectives
The current challenges of psychiatric nosology and semiology are part of an interdisciplinary and integrative framework. The paradigm of the personalized and precision psychiatry proposes to study this discipline according to new approaches and methodologies. Personalized and precision psychiatry therefore requires clarification of its concepts. To our knowledge, there is no systematic exploration of the literature on the application of the concepts of personalized and precision medicine in the field of psychiatry. This article proposes thus to explore the framework of personalized and precision medicine applied to psychiatry.
Methods
We explored the framework of personalized and precision medicine applied to psychiatry by a textual network analysis. Firstly, we performed a systematic text-mining (Natural Language Processing) from an exhaustive review of the international literature with the terms “precision psychiatry” and “personalized psychiatry”. Secondly, this analysis of textual data allowed us to build a textual network which made it possible to visualize the most proximal terms (the most frequently associated in the literature). Finally, we extracted from the network the main dimensions explored in the scientific literature, and we studied the relative importance of each term by analyzing the network centrality. In addition, a brief bibliometric analysis was conducted.
Results
We show that personalized and precision psychiatry refers to six dimensions found in the textual network analysis which correspond to the scientific fields which study personalized and precision psychiatry: genetics, pharmacogenetics, artificial intelligence, therapeutic trials, biomarkers and staging. We explore how each dimension relates to the mechanization of psychiatric disorders. However, precision and personalized psychiatry, which tries to refine the levels of mechanistic explanations for psychiatry, suffers from a conceptual heterogeneity. Indeed, textual analysis also allows us to find terms referring to a set of heterogeneous concepts. Many methodological fields and epistemological concepts are invoked in this literature, without standardization.
Conclusions
The paradox of personalized and precision psychiatry is to associate a strong conceptual heterogeneity with a well-defined mechanistic component. Heterogeneity found in literature on personalized and precision psychiatry testifies to the lack of a pluralist and integrative theoretical framework. This framework could be based on a naturalizing but non-reducing formalism, aware of the societal challenges of the sciences and their implementation in the research and clinical systems of psychiatry.},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
Méthodes. – Une analyse en réseau par fouille de données textuelles systématique issue d’une revue exhaustive de la littérature internationale autour des termes de “precision psychiatry” et de “personalized psychiatry” a été réalisée. Cette fouille de données textuelles a été représentée sous forme d’un réseau permettant d’analyser les dimensions et les concepts de la psychiatrie personnalisée et de précision. Résultats. – La psychiatrie personnalisée et de précision renvoie à six dimensions retrouvées au sein de l’analyse du réseau textuel. Ces six dimensions correspondent aux domaines scientifiques qui étu- dient la psychiatrie personnalisée et de précision, à savoir : la génétique, la pharmacogénétique, les approches computationnelles, le raffinement des essais thérapeutiques, les biomarqueurs et la stadifica- tion. L’analyse des termes renvoie à un ensemble de concepts hétérogènes.
Conclusions. – L’hétérogénéité retrouvée dans la littérature sur la psychiatrie personnalisée et de précision peut témoigner d’un manque d’un cadre théorique pluraliste et intégratif. Ce cadre de travail pourrait être basé sur un formalisme naturalisant mais non réducteur, conscient des enjeux sociétaux des sciences et de leur implémentation dans les dispositifs de recherche et cliniques de la psychiatrie.
Objectives
The current challenges of psychiatric nosology and semiology are part of an interdisciplinary and integrative framework. The paradigm of the personalized and precision psychiatry proposes to study this discipline according to new approaches and methodologies. Personalized and precision psychiatry therefore requires clarification of its concepts. To our knowledge, there is no systematic exploration of the literature on the application of the concepts of personalized and precision medicine in the field of psychiatry. This article proposes thus to explore the framework of personalized and precision medicine applied to psychiatry.
Methods
We explored the framework of personalized and precision medicine applied to psychiatry by a textual network analysis. Firstly, we performed a systematic text-mining (Natural Language Processing) from an exhaustive review of the international literature with the terms “precision psychiatry” and “personalized psychiatry”. Secondly, this analysis of textual data allowed us to build a textual network which made it possible to visualize the most proximal terms (the most frequently associated in the literature). Finally, we extracted from the network the main dimensions explored in the scientific literature, and we studied the relative importance of each term by analyzing the network centrality. In addition, a brief bibliometric analysis was conducted.
Results
We show that personalized and precision psychiatry refers to six dimensions found in the textual network analysis which correspond to the scientific fields which study personalized and precision psychiatry: genetics, pharmacogenetics, artificial intelligence, therapeutic trials, biomarkers and staging. We explore how each dimension relates to the mechanization of psychiatric disorders. However, precision and personalized psychiatry, which tries to refine the levels of mechanistic explanations for psychiatry, suffers from a conceptual heterogeneity. Indeed, textual analysis also allows us to find terms referring to a set of heterogeneous concepts. Many methodological fields and epistemological concepts are invoked in this literature, without standardization.
Conclusions
The paradox of personalized and precision psychiatry is to associate a strong conceptual heterogeneity with a well-defined mechanistic component. Heterogeneity found in literature on personalized and precision psychiatry testifies to the lack of a pluralist and integrative theoretical framework. This framework could be based on a naturalizing but non-reducing formalism, aware of the societal challenges of the sciences and their implementation in the research and clinical systems of psychiatry.
Stefanija, Ana Pop; Pierson, Jo
Practical AI Transparency: Revealing Datafication and Algorithmic Identities Journal Article
In: Journal of Digital Social Research, vol. 2, no. 3, 2020.
@article{Stefanija2020,
title = {Practical AI Transparency: Revealing Datafication and Algorithmic Identities},
author = {Ana Pop Stefanija and Jo Pierson},
url = {https://www.jdsr.io/articles/2020/11/8/practical-ai-transparency-revealing-datafication-and-algorithmic-identities},
doi = {10.33621/jdsr.v2i3.32},
year = {2020},
date = {2020-11-09},
urldate = {2020-11-09},
journal = {Journal of Digital Social Research},
volume = {2},
number = {3},
abstract = {How does one do research on algorithms and their outputs when confronted with the inherent algorithmic opacity and black box-ness as well as with the limitations of API-based research and the data access gaps imposed by platforms’ gate-keeping practices? This article outlines the methodological steps we undertook to manoeuvre around the above-mentioned obstacles. It is a “byproduct” of our investigation into datafication and the way how algorithmic identities are being produced for personalisation, ad delivery and recommendation. Following Paßmann and Boersma’s (2017) suggestion for pursuing “practical transparency” and focusing on particular actors, we experiment with different avenues of research. We develop and employ an approach of letting the platforms speak and making the platforms speak. In doing so, we also use non-traditional research tools, such as transparency and regulatory tools, and repurpose them as objects of/for study. Empirically testing the applicability of this integrated approach, we elaborate on the possibilities it offers for the study of algorithmic systems, while being aware and cognizant of its limitations and shortcomings.},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
Malanski, Priscila Duarte; Dedieu, Benoît; de Alencar Schiavi, Sandra Mara
Mapping the research domains on work in agriculture. A bibliometric review from Scopus database Journal Article
In: Journal of Rural Studies, 2020, ISSN: 0743-0167.
@article{Malanski2020b,
title = {Mapping the research domains on work in agriculture. A bibliometric review from Scopus database},
author = {Priscila Duarte Malanski and Benoît Dedieu and Sandra Mara de Alencar Schiavi},
url = {http://www.sciencedirect.com/science/article/pii/S0743016720311864},
doi = {https://doi.org/10.1016/j.jrurstud.2020.10.050},
issn = {0743-0167},
year = {2020},
date = {2020-10-27},
urldate = {2020-10-27},
journal = {Journal of Rural Studies},
abstract = {Near to half of world population lives in rural areas, and agriculture is responsible for 28% of global employment. Structural changes in agriculture impacting labor and the low attractivity of employment and working conditions in this sector are the major issues for the permanence and renewal of the rural workforce. Promoting decent work is essential to reach sustainable development. According to the ILO definition, decent work involves a wide range of conditions linked between them that include and go beyond farming work (e.g. gender equity, workplace security, fair income, among others). This complex situation requires for scientists the analysis of the diverse topics, as well as the development of interdisciplinary approaches to deal with this diversity. A review of the scientific literature is necessary to summarize the knowledge that has been produced and identify the current trends related to work in agriculture. In order to provide a background in this topic, the aim of this study was to review the state of the international literature related to work in agriculture, through a bibliometric analysis of scientific articles indexed in Scopus bibliographical database. Our findings show that USA, UK, France and China are the leaders in the scientific landscape according to: geographical production of knowledge, main journals and authors, and most-cited articles. The analysis of work in agriculture is declined in five main research domains: 1) social issues in rural areas; 2) labor market; 3) household strategies of labor allocation, 4) work organization in livestock farms; and 5) occupational health in farms. These research domains are investigated by four main scientific communities that prevail in the international literature: 1) agricultural economics; 2) ergonomics; 3) social issues for rural development; and 5) livestock farming systems. Besides those mainstream research, three major research trends emerged: 1) migration and precarious employment condition; 2) work issues in advisory services; and 3) labor governance in global value chains. These trends reflect ongoing transformations in agriculture that are important to think about the future of the work in this sector and its impacts on sustainable development. We show for the first time the characteristics of the main scientific communities that have performed the most relevant research indexed in Scopus database related to work in agriculture over the past 10 years. This review offers an overview in an interdisciplinary topic, and provides a benchmark for future cutting-edge research. The ILO definition of decent work can be a guideline for focus and deepen specific topics, since our findings indicate that several of them are linked to work-related issues in agriculture, which could support sustainable development on this sector.},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
Bordignon, Frederique
A scientometric review of permafrost research based on textual analysis (1948-2020) Journal Article
In: Scientometrics, 2020.
@article{Bordignon2020,
title = {A scientometric review of permafrost research based on textual analysis (1948-2020)},
author = {Frederique Bordignon},
url = {https://rdcu.be/b8FBh
http://dx.doi.org/10.17632/d8gvm96ykm.1
https://hal-enpc.archives-ouvertes.fr/hal-02963536v1},
doi = {https://doi.org/10.1007/s11192-020-03747-4},
year = {2020},
date = {2020-10-17},
urldate = {2020-10-17},
journal = {Scientometrics},
abstract = {This article proposes an analysis of research dedicated to permafrost. Its originality is twofold: it covers a corpus (n=16,249) that has never been reviewed before and also makes use of a methodology based on successive textual analysis processes. With the text-mining of additional corpuses, we produce lists of qualified terms to fine-tune the indexing of the main corpus and isolate relevant terminology dedicated to infrastructure and soil properties. With these enrichments combined with other terminological extractions (such as place names recognition), we reveal the internal structure of permafrost research with the help of visual mapping and easily prove that permafrost research is multidisciplinary and multi-topical The semantic map and the diachronic analysis of terms clusters show that the interest had turned since the 1980s towards the role of climate change but also on China's needs for its highway and railway construction sites. The very strong and growing impact of Chinese research, focused on the Tibetan area, is one of the highlights of our data. Furthermore, we propose a focus on infrastructure vulnerability and use soil properties as a proxy to measure the existing interactions between two distinct research communities. The results suggest that research has mainly focused so far on the feasibility of building on frozen ground and exploiting soils, but remains at an early stage of addressing the impact of global warming on infrastructure degradation and its resilience. This study offers insights to permafrost experts, but also provide a methodology that could be reused for other investigations. },
keywords = {},
pubstate = {published},
tppubtype = {article}
}
NotesVIEW ALL
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Long trends on twitter: intertemporal clusters combining hashtags and terms on Scientometrics, Altmetrics, Bibliometrics and Science Of Science
Long trends on twitter: inter-temporal clusters combining hashtags and terms, for all tweets on Scientometrics, Altmetrics, Bibliometrics and Science Of Science from Jan. 2017 to dec. 2021, on a semester base. Query used to extract tweets: lang:en (Scientometrics OR “ScienceOfScience” OR “Science Of Science” OR “Altmetrics” OR “altmetric” OR “bibliometrics” OR “bibliometric” OR “citation metrics” […]
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Présenter CorTexT Manager en 2 minutes
Cortext Manager est une application web construite par des chercheurs et par des ingénieurs à destination de chercheurs en sciences humaines et sociales, au plus près des questions portées par les chercheurs qui nous entourent et par notre communauté d’utilisateurs. Cette application web peut produire un grand nombre d’analyses différentes qui ont trait aux champs […]
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Analysis of the scientific production that mentioned the use of CorText Manager
There are two ways to understand what CorTexT Manager is. The first one is to look at what has been achieved in terms of methods, tools and therefore lines of code. The second one is studied below, by analyzing (here with CorTexT Manager) what academic users have published using… CorTexT Manager. Our study of the […]
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10 years of CorText Manager v2
It took us more than 10 years to come with CorText Manager version 2 as it is now! Behind the scenes CorText Manager begun with a first version in 2009. More than thirty contributors has worked directly or indirectly on the two versions, year after year. All the ideas, inspirations, all this accumulation of pieces […]
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RISIS Training: Thematic and spatial analysis of technologies using CorText Manager and RISIS patent database
One of the best CorText Manager training courses was organized and offered by the RISIS project. Here is the program of this training which lasted 3 days: Monday 08/11/21 14h-16h30: Session 1 Session 1a: Introduction on patent analysis (60’) Introductory lecture session • Welcoming introduction (Philippe Larédo) 5’ • Type of patents documents (Antoine Schoen) […]
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Early 2021 CorText Manager training sessions
CorText organized a series of training workshops on CorText Manager and its methods in January 2021! These workshops were imagined as a staircase with three successive steps : Session 1: Introduction Session 2: Method comparisons Session 3: Research questions and work on user’s corpus For these sessions, the subject chosen for the demonstrations and exercises […]
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Seminar and workshop during the Summer School of PPGCI IBICT UFRJ, Rio de Janeiro – 03/2020
In March 2020, the LabEx SITES post-doctoral researcher, Ale Abdo, traveled to Rio de Janeiro and São Paulo to organize two trainings on textual analysis and on a new method he developed and integrated at the CorText Infrastructure, as well as to participate in discussions on open and citizen science in Brazil, including the discussion […]
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A CorText Manager distance training session in the framework of the nanocellulose project – Grenoble, June 2020
For complementing the RISIS access requested (to Leiden publications DB and RISIS patent DB) by the GAEL laboratory (UMR INRAE, CNRS, UGA, INPG), in the framework of a research project on nanocellulose, the CorText team has provided , in June and July 2020, an advanced training on the use of CorText. After setting up of […]
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